Question: How come mod_tls does not support "implicit" FTPS (i.e. automatically encrypting sessions on port 990)?
Answer: The short answer is because the Draft no longer specifies support for such a mode. Here is a description of why the alternatives to the current mode (client-requested encryption using standard control channel) are "bad".

The long answer is covered in Eric Rescorla's excellent book, "SSL and TLS". There tend to be two different strategies used when adding new features to a protocol: separate ports for protocol variants, or upward negotiation. Port 443 for HTTPS is an example of the separate ports strategy. The drawback to the separate ports approach is that there is a finite number of ports available, and so this approach does not scale well. The benefit is that use of separate ports tends to require smaller changes to client and server code. Upward negotiation is more flexible, but requires that the protocol support some sort of feature negotiation or extension discovery, allowing clients and servers to easily agree to negotiate "upward" into a secure channel. The authors of the FTPS Draft felt that upward negotiation was the more appropriate of these two approaches for encrypting FTP channels.